PPDB

 The Plant Proteome Database

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AT5G57710.1   Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
Lab Annot. Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases protein
Mapman: 20.2.1 stress.abiotic.heat
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G30350.1 11Arabidopsis thaliana0103448640 (0)_
AT3G52490.1 11Arabidopsis thaliana1E-10282732490 (0)_
AT1G07200.2 11Arabidopsis thaliana3E-96104528470 (0)_
Os08g15230.1 7Oryza sativa0109141560 (0)_
Os02g54720.1 7Oryza sativa6E-7151537540 (0)C
Os04g23220.1 7Oryza sativa3E-6561633470 (0)M
GRMZM2G117836_P01 3.21Zea mays0108940570 (0)_
v1_GRMZM2G117836_P01 4a53Zea mays0108940570 (0)_
Zm00001eb412800_P002 agpv5Zea mays0108940570 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA_2(2) Clp_N(3)
TargetP: Chloroplast (Class 5 C0.378; M0.138; S0.003; _0.356)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 990 aa (-cTP 905) (-lTP 891)
Molecular Weight 108.71 kDA(-cTP 99.59)(-lTP 98.24)
PI 8.32(-cTP 7.61)(-lTP 7.903)

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1091Detail        [A. thaliana] R4Strep Complemented
2150Detail       Total leaf [A. thaliana] total soluble stromawt & cgep

* For details about the exprimental sources click here.

Published Proteomics Data

 20733066(phosphoproteome-ABA-leaf)
20813957(SUMO proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help