PPDB

PPDB	The Plant Proteome Database

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AT5G57440.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Lab Annot.

haloacid dehalogenase-like hydrolase protein
Mapman: 12.2.99 N-metabolism.ammonia metabolism.unspecified

Curated Location

TAIR curated location: mitochondrion14671022

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G25840.1 11 Arabidopsis thaliana 2E-152 248 83 91 28 (17) C
AT4G21470.1 11 Arabidopsis thaliana 2E-35 227 34 54 1 (0) S
AT1G56500.1 11 Arabidopsis thaliana 1E-06 215 27 44 384 (375) C
Os08g14580.1 7 Oryza sativa 1E-113 231 66 80 5 (5) _
Os10g32730.2 7 Oryza sativa 1E-43 225 38 57 0 (0) _
Os10g32730.1 7 Oryza sativa 1E-43 225 38 57 0 (0) _
GRMZM2G102231_P02 3.21 Zea mays 2E-115 234 67 81 6 (6) C
Zm00001eb414640_P003 agpv5 Zea mays 2E-115 234 67 81 0 (0) C
v1_GRMZM2G102231_P02 4a53 Zea mays 2E-115 234 67 81 5 (5) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	HAD(1) HAD_2(1) Hydrolase(1) Hydrolase_3(2) Hydrolase_6(2) Hydrolase_like(1) Iso
TargetP:	Cytoplasm (Class 3 C0.061; M0.210; S0.067; _0.807)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	240 aa (-cTP 235)
Molecular Weight	26.78 kDA(-cTP )
PI	5.59(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
622	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
1392	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1394	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1397	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1408	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1411	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21173025(root proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data