PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G57350.1   H[+]-ATPase 3

Lab Annot. ATPase 3, plasma membrane-type
Mapman: 34.1.2 transport.p- and v-ATPases.H+-exporting ATPase
Curated Location plasma membrane

TAIR curated location: plasma membrane8718619
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G57350.4 11Arabidopsis thaliana09491001000 (0)_
AT5G57350.2 11Arabidopsis thaliana094910010070 (51)_
AT4G30190.1 11Arabidopsis thaliana09478893217 (187)_
Os04g56160.1 7Oryza sativa0949839274 (74)_
Os04g56160.3 7Oryza sativa090884928 (8)_
Os12g44150.1 7Oryza sativa0950809067 (67)_
Zm00001eb432500_P001 agpv5Zea mays094984920 (0)_
GRMZM2G006894_P02 3.21Zea mays0949849255 (53)_
v1_GRMZM2G006894_P02 4a53Zea mays0949849265 (65)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cation_ATPase(1) Cation_ATPase_N(1) E1-E2_ATPase(5) Hydrolase(1) Hydrolase_3(2)
TargetP: Cytoplasm (Class 1 C0.074; M0.059; S0.028; _0.904)
Predotar:
Subcel. Location:
TM-HMM prediction: 8 TMs
Aramemnon: 10 TMs
TAT position:
Length 949 aa (-cTP 921)
Molecular Weight 104.45 kDA(-cTP )
PI 6.73(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
337Detail       bundle sheaths [A. thaliana]Bundle sheath total BS strands wild-type
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
1345Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 1)
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1576Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1577Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1578Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1579Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1580Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1581Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2239Detail       seedlings [A. thaliana] total tissue gfs9
2245Detail       seedlings [A. thaliana] total tissue wild-type
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2301Detail        [A. thaliana] Clp C1 TRAP
2302Detail        [A. thaliana] Clp C1 WT
2306Detail        [A. thaliana] Clp C1 TRAP
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

15308754(plasma membrane (phosphorylated))
17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
17432890(leaf total membranes)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
17216043(leaf)
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
20706207(contaminants cell cycle interactome (cell culture))
19114538(guard cells Arabidopsis leaf)
21533090(plasmodesmata-crude)
20843791(DRM-enriched plasmamembrane)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help