PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G57330.1   Galactose mutarotase-like superfamily protein

Lab Annot. aldose 1-epimerase protein
Mapman: 3.5 minor CHO metabolism.others
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G61610.2 11Arabidopsis thaliana1E-14730763800 (0)_
AT3G61610.1 11Arabidopsis thaliana3E-14730464810 (0)_
AT3G01590.2 11Arabidopsis thaliana3E-13830463773 (1)_
Os04g56290.1 7Oryza sativa4E-18030276892 (2)_
Os04g56290.5 7Oryza sativa4E-18030276892 (2)_
Os04g56290.2 7Oryza sativa4E-18030276892 (2)_
Zm00001eb067700_P002 agpv5Zea mays2E-17130275890 (0)_
Zm00001eb067700_P001 agpv5Zea mays2E-17130275890 (0)_
Zm00001eb178250_P001 agpv5Zea mays1E-17030475870 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Aldose_epim(1)
TargetP: Cytoplasm (Class 2 C0.135; M0.075; S0.029; _0.872)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 312 aa (-cTP 230)
Molecular Weight 35.45 kDA(-cTP )
PI 5.73(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1494Detail       leaf [A. thaliana]  
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2311Detail       leaf [A. thaliana] PG plastoglobule 
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(ABA effected phosphoproteome)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21413152(Xylem-sap (BrassicaOleracea))
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help