PPDB

PPDB	The Plant Proteome Database

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AT5G57000.1 DEAD-box ATP-dependent RNA helicase

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G57000.2 11 Arabidopsis thaliana 1E-91 133 99 100 0 (0) _
AT1G72690.1 11 Arabidopsis thaliana 1E-13 76 43 64 0 (0) _
AT1G17490.1 11 Arabidopsis thaliana 2E-10 68 44 61 3 (3) _
Os09g19910.1 7 Oryza sativa 2E-24 116 49 64 0 (0) _
Zm00001eb310990_P001 agpv5 Zea mays 1E-20 114 47 59 0 (0) _
GRMZM2G082019_P01 3.21 Zea mays 1E-20 114 47 59 0 (0) _
v1_GRMZM2G082019_P01 4a53 Zea mays 1E-20 114 47 59 0 (0) _

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Neur_chan_memb(1) UFC1(2)
TargetP:	Cytoplasm (Class 1 C0.080; M0.127; S0.093; _0.941)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	187 aa (-cTP 178)
Molecular Weight	21.04 kDA(-cTP )
PI	8.37(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17272265(ubiquinated proteins (suspension cells))
19253305(phosphoproteins (etiolated seedling))
19376835(leaf phosphoproteins)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data