PPDB

The Plant Proteome Database

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AT5G56980.1   cotton fiber protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G26130.1 11Arabidopsis thaliana5E-5537844521 (1)S
AT2G26110.1 11Arabidopsis thaliana2E-2026732440 (0)_
Os05g46340.1 7Oryza sativa2E-1015033460 (0)_
Os01g51310.1 7Oryza sativa4E-099038540 (0)_
v1_GRMZM2G476230_P01 4a53Zea mays2E-1114133490 (0)S
Zm00001eb383930_P001 agpv5Zea mays2E-1114133490 (0)S
GRMZM2G476230_P01 3.21Zea mays2E-1114133490 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4408(1) DUF761(1)
TargetP: Secreted (Class 2 C0.018; M0.057; S0.815; _0.166)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 379 aa (-cTP 350)
Molecular Weight 42.73 kDA(-cTP )
PI 9.18(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1260Detail       leaf [A. thaliana] co-IP SHOOT1 (rep. 1) thylakoid membranewild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


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