PPDB

The Plant Proteome Database

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AT5G56960.1   basic helix-loop-helix (bHLH) DNA-binding family protein

Lab Annot. basic helix-loop-helix (bHLH) DNA-binding protein
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G56960.2 11Arabidopsis thaliana048594940 (0)_
AT5G57150.3 11Arabidopsis thaliana2E-0917330470 (0)_
AT5G57150.2 11Arabidopsis thaliana2E-0917330470 (0)_
Os01g09990.2 7Oryza sativa8E-2213943610 (0)_
Os01g09990.1 7Oryza sativa8E-2213943610 (0)_
Os01g09930.1 7Oryza sativa7E-2114742570 (0)_
v1_GRMZM2G340177_P01 4a53Zea mays2E-3231833530 (0)C
GRMZM2G340177_P01 3.21Zea mays2E-3231833530 (0)C
Zm00001eb385110_P001 agpv5Zea mays2E-3131833530 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HLH(1) KinB_sensor(1)
TargetP: Cytoplasm (Class 5 C0.425; M0.027; S0.178; _0.441)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 466 aa (-cTP 411)
Molecular Weight 52.74 kDA(-cTP )
PI 9.36(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help