PPDB

The Plant Proteome Database

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AT5G56950.1   nucleosome assembly protein 1%3B3

Lab Annot. nucleosome assembly protein (NAP), putative
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G26110.1 11Arabidopsis thaliana0376819167 (52)_
AT4G26110.2 11Arabidopsis thaliana2E-178302879459 (45)_
AT2G19480.3 11Arabidopsis thaliana3E-1733747588170 (131)_
Os05g46230.1 7Oryza sativa4E-149380637826 (26)_
Os06g05660.3 7Oryza sativa1E-140308718422 (22)_
Os06g05660.1 7Oryza sativa1E-140309718422 (22)_
Zm00001eb294250_P002 agpv5Zea mays5E-15838863780 (0)_
Zm00001eb294250_P004 agpv5Zea mays2E-15639163780 (0)_
Zm00001eb294250_P001 agpv5Zea mays2E-15639163770 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BUD22(2) NAP(1) Nop14(2) OmpH(2) Sporozoite_P67(1)
TargetP: Cytoplasm (Class 2 C0.138; M0.086; S0.091; _0.869)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 374 aa (-cTP 352)
Molecular Weight 43.29 kDA(-cTP )
PI 4.42(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1576Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1577Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1579Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1932Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
2255Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9
2258Detail       leaf [A. thaliana] total seedlings gfs9
2259Detail       leaf [A. thaliana] total seedlings gfs9
2312Detail       leaf [A. thaliana] thylakoids thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
19714877(interactomes 14-3-3 complexes (cell culture))
21325567(root-proteome (wt & det3))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


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