PPDB

PPDB	The Plant Proteome Database

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AT5G56900.2 CwfJ-like family protein / zinc finger (CCCH-type) family protein

Lab Annot.

Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G56900.3 11 Arabidopsis thaliana 0 503 100 100 0 (0) M
AT5G56900.1 11 Arabidopsis thaliana 0 404 100 100 4 (0) _
AT1G56290.1 11 Arabidopsis thaliana 1E-15 219 27 47 0 (0) _
Os09g19940.1 7 Oryza sativa 0 603 57 72 0 (0) C
Os09g19940.2 7 Oryza sativa 0 486 57 71 0 (0) _
Os03g52980.1 7 Oryza sativa 4E-14 251 23 44 0 (0) _
Zm00001eb311020_P001 agpv5 Zea mays 0 601 56 70 0 (0) C
GRMZM2G306935_P02 3.21 Zea mays 0 601 56 70 0 (0) C
Zm00001eb311020_P002 agpv5 Zea mays 9E-159 407 57 71 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CwfJ_C_1(1) CwfJ_C_2(1) Torus(2) zf-CCCH(2) zf-CCCH_2(2) zf_CCCH_4(2)
TargetP:	Mitochondria (Class 3 C0.070; M0.804; S0.025; _0.238)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	596 aa (-cTP 575)
Molecular Weight	66.42 kDA(-cTP )
PI	6.17(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
21515685(GreenCut2)

Comparative Proteomics Data