PPDB

 The Plant Proteome Database

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AT5G56870.1   beta-galactosidase 4
Lab Annot. beta-galactosidase 4
Mapman: 26.3 misc.gluco-, galacto- and mannosidases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G26140.1 11Arabidopsis thaliana072781880 (0)S
AT4G26140.7 11Arabidopsis thaliana075278850 (0)S
AT3G52840.2 11Arabidopsis thaliana072578880 (0)S
Os01g39830.1 7Oryza sativa069866790 (0)S
Os06g37560.1 7Oryza sativa0698657912 (12)S
Os02g12730.1 7Oryza sativa070564804 (4)S
Zm00001eb385210_P001 agpv5Zea mays070465790 (0)S
GRMZM2G027385_P03 3.21Zea mays0704657918 (18)S
GRMZM2G027385_P01 3.21Zea mays0704657918 (18)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: BetaGal_dom4_5(2) GHD(1) Glyco_hydro_35(1) Glyco_hydro_42(1)
TargetP: Secreted (Class 1 C0.007; M0.057; S0.963; _0.026)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 724 aa (-cTP 699)
Molecular Weight 80.59 kDA(-cTP )
PI 8.88(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

 WallDB-E.Jamet(cell wall reference proteome)
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help