PPDB

The Plant Proteome Database

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AT5G56780.1   effector of transcription2

Lab Annot.
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G26170.1 11Arabidopsis thaliana5E-8828254700 (0)C
AT5G56770.1 11Arabidopsis thaliana2E-6824952610 (0)M
Os07g39800.1 7Oryza sativa1E-6962331430 (0)_
Zm00001eb325970_P002 agpv5Zea mays1E-6133839520 (0)_
GRMZM6G613247_P02 3.21Zea mays1E-6133839520 (0)_
v1_GRMZM2G408430_P02 4a53Zea mays1E-6133839520 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2043(3) DUF5763(1) SCA7(4)
TargetP: Cytoplasm (Class 2 C0.055; M0.109; S0.131; _0.925)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 483 aa (-cTP 410)
Molecular Weight 54.59 kDA(-cTP )
PI 9.08(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help