PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G56730.1   Insulinase (Peptidase family M16) protein

Lab Annot. peptidase M16 family (location not clear)
Mapman: 29.5.7.4.1* protein.degradation.metalloprotease.ME.M16
Curated Location plastid (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G42390.2 11Arabidopsis thaliana5E-2561422400 (0)C
AT5G42390.1 11Arabidopsis thaliana5E-256142240452 (321)C
AT1G06900.1 11Arabidopsis thaliana2E-06182254620 (15)_
Os01g37825.1 7Oryza sativa099970837 (7)_
Os01g37825.2 7Oryza sativa082669834 (4)_
Os06g41990.2 7Oryza sativa1E-20215304857 (57)C
GRMZM2G392649_P01 3.21Zea mays0488627612 (12)_
Zm00001eb162240_P003 agpv5Zea mays099071840 (0)_
Zm00001eb162240_P001 agpv5Zea mays082668820 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Methyltransf_14(2) Peptidase_M16(2) Peptidase_M16_C(2)
TargetP: Cytoplasm (Class 3 C0.030; M0.316; S0.085; _0.767)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 2 TMs
TAT position:
Length 1008 aa (-cTP 984)
Molecular Weight 113.62 kDA(-cTP )
PI 5.49(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
342Detail       leaf [A. thaliana] chloroplast low density membranewild-type
877Detail       leaf [A. thaliana] chloroplast stromawild-type
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)
1934Detail       leaf [A. thaliana] chloroplast wild-type
1935Detail       leaf [A. thaliana] chloroplast wild-type
1937Detail       leaf [A. thaliana] chloroplast Prep1_Prep2
1938Detail       leaf [A. thaliana] chloroplast Prep1_Prep2
1983Detail       leaf [A. thaliana] plastid wild-type
1986Detail       leaf [A. thaliana] plastid Prep1_Prep2
1987Detail       leaf [A. thaliana] plastid Prep1_Prep2
1988Detail       leaf [A. thaliana] plastid Prep1_Prep2

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(MITO/PLASTID-LOPIT-callus)
18431481(chloroplast)
20061580(chloroplast envelope (inner+outer))
21311031(mitochondria)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help