PPDB

The Plant Proteome Database

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AT5G56720.1   Lactate/malate dehydrogenase family protein

Lab Annot. malate dehydrogenase, cytosolic, putative
Mapman: 8.2.9 TCA / org.transformation.other organic acid transformations.cyt MDH
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G04410.1 11Arabidopsis thaliana5E-18033072851138 (873)_
AT5G43330.1 11Arabidopsis thaliana1E-1793307285161 (144)_
AT5G58330.2 11Arabidopsis thaliana6E-783244360790 (578)C
Os10g33800.1 7Oryza sativa0330738685 (85)_
Os04g46560.1 7Oryza sativa8E-16732967840 (0)M
Os10g33800.2 7Oryza sativa2E-165303728676 (76)_
v1_GRMZM2G415359_P02 4a53Zea mays03297387116 (115)_
GRMZM2G415359_P02 3.21Zea mays03297387114 (111)_
Zm00001eb045790_P004 agpv5Zea mays032973870 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 3Beta_HSD(1) Ldh_1_C(2) Ldh_1_N(1)
TargetP: Secreted (Class 3 C0.001; M0.035; S0.946; _0.387)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon:
TAT position:
Length 372 aa (-cTP 368)
Molecular Weight 40.78 kDA(-cTP )
PI 5.63(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
102Detail       petal [B. oleracea] plastid stromaAlboglabra
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
873Detail       leaf [A. thaliana] chloroplast stromawild-type
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

17432890(leaf total membranes)
18436743(specific to roots)
18814325(cotyledons)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help