PPDB

 The Plant Proteome Database

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AT5G56670.1   Ribosomal protein S30 family protein
Lab Annot. 40S ribosomal protein S30 (RPS30C)
Mapman: 29.2.1.2.1.30 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S30
Curated Location cytosol
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G29390.1 11Arabidopsis thaliana9E-386210010032 (32)M
AT2G19750.1 11Arabidopsis thaliana9E-386210010032 (32)M
Os06g07580.1 7Oryza sativa3E-2962961004 (4)M
Os06g07580.2 7Oryza sativa3E-29629610010 (10)M
Os02g56014.1 7Oryza sativa3E-29629610010 (10)M
GRMZM5G805526_P01 3.21Zea mays3E-29629610059 (59)M
v1_GRMZM2G096690_P01 4a53Zea mays3E-29629610063 (62)M
Zm00001eb281710_P001 agpv5Zea mays3E-2962961000 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Ribosomal_S30(1)
TargetP: Mitochondria (Class 4 C0.183; M0.767; S0.012; _0.455)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 62 aa (-cTP 16)
Molecular Weight 6.89 kDA(-cTP )
PI 12.24(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1334Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1352Detail       leaf [A. thaliana] total tissue Prep1_Prep2
1353Detail       leaf [A. thaliana] total tissue Prep1_Prep2_t1
1357Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1420Detail        [A. thaliana]  
1496Detail       leaf [A. thaliana] Prep1_Prep2_t1_t2
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2236Detail       seedlings [A. thaliana] total tissue gfs9
2237Detail       seedlings [A. thaliana] total tissue gfs9
2238Detail       seedlings [A. thaliana] total tissue gfs9
2239Detail       seedlings [A. thaliana] total tissue gfs9
2240Detail       seedlings [A. thaliana] total tissue gfs9
2241Detail       seedlings [A. thaliana] total tissue gfs9
2242Detail       seedlings [A. thaliana] total tissue gfs9
2243Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

 17934214(cytosolic ribosome)

Comparative Proteomics Data

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