PPDB

PPDB	The Plant Proteome Database

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AT5G56420.1 F-box/RNI-like/FBD-like domains-containing protein

Lab Annot.

F-box/RNI-like/FBD-like domains-containing protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G56420.3 11 Arabidopsis thaliana 0 422 100 100 0 (0) _
AT5G56420.2 11 Arabidopsis thaliana 0 422 100 100 0 (0) _
AT1G32375.1 11 Arabidopsis thaliana 6E-117 424 47 64 0 (0) S
Os07g06900.1 7 Oryza sativa 6E-17 445 24 41 0 (0) _
Os01g52970.1 7 Oryza sativa 2E-15 392 27 44 0 (0) _
Os04g36000.1 7 Oryza sativa 2E-15 435 24 37 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	F-box(3) F-box-like(2) FBD(1) LRR_2(2)
TargetP:	Cytoplasm (Class 4 C0.070; M0.274; S0.021; _0.573)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	422 aa (-cTP 361)
Molecular Weight	48.15 kDA(-cTP )
PI	8.41(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data