PPDB

The Plant Proteome Database

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AT5G56360.1   calmodulin-binding protein

Lab Annot. calmodulin-binding protein
Mapman: 30.3 signalling.calcium
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G42390.1 11Arabidopsis thaliana1E-4612959680 (0)S
Os01g16970.1 7Oryza sativa0641506523 (23)S
Os01g16970.2 7Oryza sativa0605506423 (23)S
Os01g16970.3 7Oryza sativa2E-180633496213 (13)S
Zm00001eb128910_P002 agpv5Zea mays065149640 (0)S
AC213600.3_FGP002 3.21Zea mays065149640 (0)S
Zm00001eb332690_P003 agpv5Zea mays063953650 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Atg14(2) PRKCSH(1) PRKCSH-like(2) PRKCSH_1(1)
TargetP: Secreted (Class 1 C0.040; M0.091; S0.953; _0.006)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 647 aa (-cTP 625)
Molecular Weight 73.21 kDA(-cTP )
PI 4.69(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
2251Detail       seedlings [A. thaliana] total tissue wild-type
2304Detail        [A. thaliana] Clp C1 WT
2314Detail       leaf [A. thaliana] thylakoids thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help