PPDB

PPDB	The Plant Proteome Database

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AT5G56310.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G20540.1 11 Arabidopsis thaliana 4E-133 510 40 62 0 (0) _
AT5G66520.1 11 Arabidopsis thaliana 4E-126 489 40 60 4 (4) _
AT2G20540.2 11 Arabidopsis thaliana 4E-122 409 44 65 0 (0) _
Os01g15530.1 7 Oryza sativa 3E-137 393 51 69 0 (0) C
Os05g36350.1 7 Oryza sativa 1E-117 488 37 60 0 (0) C
Os03g07234.1 7 Oryza sativa 9E-113 479 39 58 0 (0) _
v1_GRMZM2G349193_P01 4a53 Zea mays 3E-138 380 52 71 0 (0) M
GRMZM2G349193_P01 3.21 Zea mays 3E-138 380 52 71 0 (0) M
Zm00001eb333410_P001 agpv5 Zea mays 3E-138 380 52 71 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Alkyl_sulf_dimr(1) BTAD(3) DYW_deaminase(1) PPR(10) PPR_1(8) PPR_2(8) PPR_3(6) P
TargetP:	Mitochondria (Class 4 C0.058; M0.522; S0.147; _0.213)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	530 aa (-cTP 475)
Molecular Weight	59.19 kDA(-cTP )
PI	7.27(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data