PPDB

PPDB	The Plant Proteome Database

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AT5G56290.1 peroxin 5

Lab Annot.

peroxin 5 (TPR protein)
Mapman: 29.3.5 protein.targeting.peroxisomes

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G11540.1 11 Arabidopsis thaliana 3E-11 242 26 41 0 (0) _
AT3G48150.1 11 Arabidopsis thaliana 3E-07 102 27 50 0 (0) M
AT3G48150.2 11 Arabidopsis thaliana 3E-07 102 27 50 0 (0) M
Os08g39080.1 7 Oryza sativa 0 757 61 73 0 (0) C
Os08g39080.2 7 Oryza sativa 0 430 67 77 0 (0) C
Os08g44510.1 7 Oryza sativa 3E-10 243 26 41 2 (2) _
Zm00001eb034080_P001 agpv5 Zea mays 0 755 60 73 0 (0) C
Zm00001eb199560_P001 agpv5 Zea mays 0 756 60 72 0 (0) C
v1_GRMZM2G169470_P02 4a53 Zea mays 0 560 66 80 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PPTA(3) TPR_1(4) TPR_10(2) TPR_11(6) TPR_12(4) TPR_14(6) TPR_16(3) TPR_17(6) TPR
TargetP:	Chloroplast (Class 3 C0.664; M0.059; S0.042; _0.140)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	728 aa (-cTP 662)
Molecular Weight	80.91 kDA(-cTP 74.00)
PI	4.72(-cTP 4.64)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data