PPDB

The Plant Proteome Database

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AT5G56280.1   COP9 signalosome subunit 6A

Lab Annot.
Mapman: 33.99 development.unspecified
Curated Location
TAIR curated location: signalosome complex & nucleus11019806,10782111
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G26430.1 11Arabidopsis thaliana031787942 (0)C
AT5G05780.2 11Arabidopsis thaliana1E-21292234561 (42)_
AT5G05780.1 11Arabidopsis thaliana2E-212952446126 (65)_
Os08g39070.1 7Oryza sativa7E-18031078874 (4)C
Os12g42810.1 7Oryza sativa2E-4820145610 (0)_
Os12g42730.2 7Oryza sativa5E-4119243580 (0)_
Zm00001eb034040_P001 agpv5Zea mays2E-17631176860 (0)C
GRMZM2G080652_P01 3.21Zea mays2E-17631176866 (4)C
v1_GRMZM2G080652_P01 4a53Zea mays2E-17631176863 (3)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4239(1) JAB(1) MitMem_reg(1) TMV_coat(1)
TargetP: Chloroplast (Class 5 C0.385; M0.052; S0.220; _0.224)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 317 aa (-cTP 278)
Molecular Weight 35.66 kDA(-cTP 31.45)
PI 6.31(-cTP 5.93)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help