PPDB

PPDB	The Plant Proteome Database

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AT5G56200.1 C2H2 type zinc finger transcription factor family

Lab Annot.

Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G04390.1 11 Arabidopsis thaliana 7E-18 185 35 49 0 (0) _
AT2G26940.1 11 Arabidopsis thaliana 1E-17 109 39 55 1 (1) _
AT2G37430.1 11 Arabidopsis thaliana 6E-17 152 34 45 0 (0) _
Os12g39400.1 7 Oryza sativa 4E-14 105 37 55 0 (0) _
Os03g32230.1 7 Oryza sativa 6E-14 91 41 57 0 (0) _
Os11g47630.1 7 Oryza sativa 7E-13 136 35 50 0 (0) _
Zm00001eb393490_P001 agpv5 Zea mays 7E-16 96 42 54 0 (0) _
GRMZM2G113860_P01 3.21 Zea mays 7E-16 96 42 54 0 (0) _
v1_GRMZM2G113860_P01 4a53 Zea mays 7E-16 96 42 54 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Vps39_2(4) zf-C2H2(4) zf-C2H2_2(4) zf-C2H2_3rep(4) zf-C2H2_4(4) zf-C2H2_6(4) zf-
TargetP:	Cytoplasm (Class 4 C0.055; M0.477; S0.048; _0.716)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	493 aa (-cTP 474)
Molecular Weight	54.53 kDA(-cTP )
PI	5.23(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data