PPDB

The Plant Proteome Database

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AT5G56150.1   ubiquitin-conjugating enzyme 30

Lab Annot. ubiquitin-conjugating enzyme 30
Mapman: 29.5.11.3 protein.degradation.ubiquitin.E2
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G64230.1 11Arabidopsis thaliana1E-99148889521 (20)_
AT1G64230.2 11Arabidopsis thaliana1E-99148889521 (20)_
AT5G41700.1 11Arabidopsis thaliana8E-99148879526 (19)_
Os04g57220.2 7Oryza sativa3E-100148899518 (18)_
Os04g57220.1 7Oryza sativa3E-100148899518 (18)_
Os04g57220.3 7Oryza sativa3E-100148899518 (18)_
GRMZM2G156517_P01 3.21Zea mays6E-10114891965 (5)_
v1_GRMZM2G156517_P01 4a53Zea mays6E-10114891964 (4)_
Zm00001eb278070_P001 agpv5Zea mays6E-10114891960 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Prok-E2_B(1) RWD(1) UEV(1) UQ_con(1)
TargetP: Cytoplasm (Class 3 C0.068; M0.278; S0.051; _0.799)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 148 aa (-cTP 63)
Molecular Weight 16.48 kDA(-cTP )
PI 6.81(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

16400686(floem_sap B. napa)
19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help