PPDB

The Plant Proteome Database

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AT5G55856.1   Ubiquitin-like superfamily protein

Lab Annot. Ubiquitin-like protein
Mapman: 29.5.11.1 protein.degradation.ubiquitin.ubiquitin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G55855.2 11Arabidopsis thaliana2E-479774830 (0)_
AT4G26840.1 11Arabidopsis thaliana1E-2480527317 (8)_
AT5G55160.1 11Arabidopsis thaliana1E-2386517031 (20)_
Os01g68950.1 7Oryza sativa8E-2489506810 (10)_
Os01g68940.1 7Oryza sativa4E-227949700 (0)_
Os07g38660.1 7Oryza sativa3E-138340590 (0)_
GRMZM2G082390_P01 3.21Zea mays6E-2686527043 (42)_
GRMZM2G053898_P02 3.21Zea mays6E-2686527043 (42)_
Zm00001eb364660_P001 agpv5Zea mays6E-268652700 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Rad60-SLD(1) ubiquitin(1)
TargetP: Cytoplasm (Class 2 C0.176; M0.088; S0.147; _0.839)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 97 aa (-cTP 59)
Molecular Weight 11.26 kDA(-cTP )
PI 6.05(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help