PPDB

 The Plant Proteome Database

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AT5G55850.3   RPM1-interacting protein 4 (RIN4) family protein
Lab Annot. RPM1-interacting protein 4 (RIN4) protein
Mapman: 30.1.1 signalling.in sugar and nutrient physiology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G55850.1 11Arabidopsis thaliana3E-437490934 (4)_
AT5G55850.2 11Arabidopsis thaliana4E-417290934 (4)_
AT2G04410.1 11Arabidopsis thaliana3E-287467793 (2)_
Os09g07920.1 7Oryza sativa9E-287963720 (0)_
Os06g17870.1 7Oryza sativa2E-207753610 (0)M
Os02g49340.1 7Oryza sativa5E-168346600 (0)_
GRMZM2G099745_P01 3.21Zea mays4E-237256680 (0)_
Zm00001eb380850_P001 agpv5Zea mays4E-237256680 (0)_
GRMZM2G162788_P02 3.21Zea mays5E-237258680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AvrRpt-cleavage(1)
TargetP: Cytoplasm (Class 2 C0.165; M0.099; S0.095; _0.853)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 79 aa (-cTP 58)
Molecular Weight 8.34 kDA(-cTP )
PI 9.00(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2021Detail       leaf [A. thaliana] total leaf tissue  

* For details about the exprimental sources click here.

Published Proteomics Data

 21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help