PPDB

The Plant Proteome Database

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AT5G55850.1   RPM1-interacting protein 4 (RIN4) family protein

Lab Annot. RPM1-interacting protein 4 (RIN4) protein
Mapman: 30.1.1 signalling.in sugar and nutrient physiology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G55850.2 11Arabidopsis thaliana1E-771121001004 (4)_
AT5G55850.3 11Arabidopsis thaliana5E-437490934 (4)_
AT2G04410.1 11Arabidopsis thaliana3E-255678873 (2)_
Os09g07920.1 7Oryza sativa3E-217755680 (0)_
Os06g17870.1 7Oryza sativa3E-173789940 (0)M
Os04g52950.1 7Oryza sativa1E-154280880 (0)_
GRMZM2G162788_P02 3.21Zea mays8E-183886920 (0)_
Zm00001eb280910_P002 agpv5Zea mays8E-183886920 (0)_
GRMZM2G099745_P01 3.21Zea mays1E-177352630 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AvrRpt-cleavage(1)
TargetP: Cytoplasm (Class 3 C0.263; M0.056; S0.075; _0.854)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 114 aa (-cTP 25)
Molecular Weight 12.22 kDA(-cTP )
PI 9.66(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2021Detail       leaf [A. thaliana] total leaf tissue  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19376835(leaf phosphoproteins)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help