PPDB

PPDB	The Plant Proteome Database

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AT5G55840.1 PPR superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G55840.2 11 Arabidopsis thaliana 0 1136 100 100 0 (0) M
AT5G55840.3 11 Arabidopsis thaliana 0 1082 99 100 0 (0) _
AT5G39710.1 11 Arabidopsis thaliana 4E-101 721 30 47 0 (0) M
Os03g40690.1 7 Oryza sativa 2E-169 872 34 55 0 (0) M
Os05g19390.1 7 Oryza sativa 3E-96 826 27 45 0 (0) M
Os07g20510.1 7 Oryza sativa 2E-95 877 27 44 0 (0) M
v1_GRMZM2G393935_P01 4a53 Zea mays 0 1080 38 58 0 (0) M
GRMZM2G393935_P01 3.21 Zea mays 0 1080 38 58 0 (0) M
Zm00001eb049980_P001 agpv5 Zea mays 0 1068 38 58 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Ank_2(2) Ank_3(2) Ank_4(2) Ank_5(1) ATP13(5) MRP-S27(7) Mtf2(3) PPR(25) PPR_1(24
TargetP:	Mitochondria (Class 5 C0.156; M0.389; S0.335; _0.055)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1136 aa (-cTP 1102)
Molecular Weight	126.66 kDA(-cTP )
PI	8.96(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data