PPDB

The Plant Proteome Database

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AT5G55840.1   PPR superfamily protein

Lab Annot. Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G55840.2 11Arabidopsis thaliana011361001000 (0)M
AT5G55840.3 11Arabidopsis thaliana01082991000 (0)_
AT5G39710.1 11Arabidopsis thaliana4E-10172130470 (0)M
Os03g40690.1 7Oryza sativa2E-16987234550 (0)M
Os05g19390.1 7Oryza sativa3E-9682627450 (0)M
Os07g20510.1 7Oryza sativa2E-9587727440 (0)M
v1_GRMZM2G393935_P01 4a53Zea mays0108038580 (0)M
GRMZM2G393935_P01 3.21Zea mays0108038580 (0)M
Zm00001eb049980_P001 agpv5Zea mays0106838580 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ank_2(2) Ank_3(2) Ank_4(2) Ank_5(1) ATP13(5) MRP-S27(7) Mtf2(3) PPR(25) PPR_1(24
TargetP: Mitochondria (Class 5 C0.156; M0.389; S0.335; _0.055)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1136 aa (-cTP 1102)
Molecular Weight 126.66 kDA(-cTP )
PI 8.96(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help