|
AT5G55660.1
DEK domain-containing chromatin associated protein
|
| Lab Annot. |
GTP binding / RNA binding
Mapman: 35.2 not assigned.unknown |
| Curated Location |
TAIR curated location: mitochondrion14671022 |
| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA PTM
Get sequence
|
Related Genes
|
#Spots: The number of publicly accessible spots are in parenthesis
|
| Prediction |
| PFAM: |
DEK_C(1) Sigma70_ner(2) |
| TargetP: |
Cytoplasm (Class 2 C0.184; M0.102; S0.107; _0.888) |
| Predotar: |
|
| Subcel. Location: |
|
| TM-HMM prediction: |
No |
| Aramemnon: |
|
| TAT position: |
|
| Length |
778 aa (-cTP 750) |
| Molecular Weight |
87.21 kDA(-cTP ) |
| PI |
4.74(-cTP ) |
|
|
Experimental Evidence
Expand
View Identified Peptides
View GeneModel
|
| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1418 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 3) |
| 1533 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 30 uM CAP | clps (rep. 1) |
| 1711 | Detail | | | | | | | | Rosettes [A. thaliana] | Thylakoids thylakoid membrane | Wild-type |
| 1713 | Detail | | | | | | | | Rosettes [A. thaliana] | Thylakoids thylakoid membrane | k1k3 |
| 1716 | Detail | | | | | | | | Rosettes [A. thaliana] | Thylakoids thylakoid membrane | k5-1 |
| 2010 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1 |
| 2246 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | gfs9 |
| 2247 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | atg5 |
| 2248 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2252 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | gfs9 |
* For details about the exprimental sources
click here.
|
|
Published Proteomics Data
|
MitoDB(Mitochondrial proteome)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19376835(leaf phosphoproteins)
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)
|
|
Comparative Proteomics Data
|
|
