|
AT5G55610.1
isopentenyl-diphosphate delta-isomerase
|
| Lab Annot. |
unknown protein
Mapman: 35.2 not assigned.unknown |
| Curated Location |
mitochondria
|
| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM
Get sequence
|
Related Genes
|
#Spots: The number of publicly accessible spots are in parenthesis
|
| Prediction |
| PFAM: |
|
| TargetP: |
Chloroplast (Class 5 C0.315; M0.236; S0.021; _0.220) |
| Predotar: |
|
| Subcel. Location: |
Lumen |
| TM-HMM prediction: |
No |
| Aramemnon: |
3 TMs |
| TAT position: |
|
| Length |
329 aa (-cTP 300) (-lTP 268) |
| Molecular Weight |
36.06 kDA(-cTP 32.98)(-lTP 29.80) |
| PI |
8.74(-cTP 8.43)(-lTP 8.486) |
|
|
Experimental Evidence
Expand
View Identified Peptides
View GeneModel
|
| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 361 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 | wild-type |
| 527 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (wt1) |
| 877 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 1347 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | wild-type (rep. 3) |
| 1394 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1397 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 3) |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1418 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 3) |
| 1421 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1422 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 2) |
| 1425 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1xprep2xt1xt2 (rep. 2) |
| 1426 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1xprep2xt1xt2 (rep. 3) |
| 1439 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | wild-type (rep. 1) |
| 1440 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | wild-type (rep. 2) |
| 1442 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | abck2xabck3 (rep. 1) |
| 1444 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | abck2xabck3 (rep. 3) |
| 1494 | Detail | | | | | | | | leaf [A. thaliana] | | |
| 1529 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 0 uM CAP | wild-type (rep. 1) |
| 1544 | Detail | | | | | | | | leaf [A. thaliana] | TiO2 thylakoid membrane | k1xk3 |
| 1545 | Detail | | | | | | | | leaf [A. thaliana] | TiO2 thylakoid membrane | wt |
| 1613 | Detail | | | | | | | | Natural Senescence leaf [A. thaliana] | | |
| 1614 | Detail | | | | | | | | Natural Senescence leaf [A. thaliana] | | |
| 1616 | Detail | | | | | | | | Natural Senescence leaf [A. thaliana] | | |
| 1707 | Detail | | | | | | | | [A. thaliana] | | sht1 |
| 1766 | Detail | | | | | | | | leaf [A. thaliana] | Thylakoids thylakoid membrane | Met1-1 |
| 1828 | Detail | | | | | | | | leaf [A. thaliana] | Thylakoids thylakoid membrane | Col-0 Fluctuating light |
| 2013 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wt |
| 2015 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | opda1-2 |
| 2247 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | atg5 |
| 2248 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2249 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | gfs9 |
| 2250 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | atg5 |
| 2251 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2271 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2273 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
* For details about the exprimental sources
click here.
|
|
Published Proteomics Data
|
15028209(Total chloroplast)
16618929(MITO/PLASTID-LOPIT-callus)
17432890(leaf total membranes)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19995723(chloroplast reference proteome)
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
|
|
Comparative Proteomics Data
|
|
