PPDB

The Plant Proteome Database

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AT5G55590.1   Pectin lyase-like superfamily protein

Lab Annot.
Mapman: 10.8.1 cell wall.pectin*esterases.PME
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G55590.2 11Arabidopsis thaliana03321001000 (0)S
AT5G47500.1 11Arabidopsis thaliana1E-9630448640 (0)S
AT5G19730.1 11Arabidopsis thaliana6E-9530146630 (0)S
Os07g41650.1 7Oryza sativa3E-13234453700 (0)S
Os07g41650.2 7Oryza sativa1E-10429651680 (0)S
Os04g46740.1 7Oryza sativa2E-9830350670 (0)S
GRMZM2G037411_P01 3.21Zea mays1E-12734551680 (0)M
Zm00001eb327190_P001 agpv5Zea mays1E-12734551680 (0)M
v1_GRMZM2G037411_P01 4a53Zea mays1E-12734551680 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LUD_dom(3) Pectinesterase(1)
TargetP: Secreted (Class 1 C0.006; M0.012; S0.984; _0.037)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 380 aa (-cTP 312)
Molecular Weight 42.47 kDA(-cTP )
PI 6.26(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help