PPDB

PPDB	The Plant Proteome Database

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AT5G55580.1 Mitochondrial transcription termination factor family protein

Lab Annot.

mTERF domain protein
Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

plastid (Pubmed: 23198870 21464319 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G55580.3 11 Arabidopsis thaliana 0 394 100 100 0 (0) C
AT5G55580.2 11 Arabidopsis thaliana 0 380 99 99 0 (0) _
AT1G78930.1 11 Arabidopsis thaliana 9E-23 349 23 47 0 (0) C
Os07g39430.1 7 Oryza sativa 8E-172 341 68 84 0 (0) C
Os03g57149.1 7 Oryza sativa 2E-26 232 30 51 6 (6) C
Os02g39040.1 7 Oryza sativa 1E-24 255 28 51 0 (0) C
Zm00001eb107900_P001 agpv5 Zea mays 4E-170 326 71 84 0 (0) M
v1_GRMZM2G130773_P01 4a53 Zea mays 5E-170 326 71 84 1 (1) M
Zm00001eb107900_P003 agpv5 Zea mays 5E-170 326 71 84 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CDC45(1) DUF3246(1) mTERF(1) PTPRCAP(1) RXT2_N(2) SPT6_acidic(1) YL1(1)
TargetP:	Chloroplast (Class 4 C0.367; M0.121; S0.121; _0.100)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	496 aa (-cTP 452)
Molecular Weight	57.20 kDA(-cTP 52.24)
PI	8.89(-cTP 8.16)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data