PPDB

PPDB	The Plant Proteome Database

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AT5G55570.1 transmembrane protein

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G55570.2 11 Arabidopsis thaliana 3E-90 131 99 99 0 (0) C
Os01g55670.1 7 Oryza sativa 1E-33 75 69 80 0 (0) M
GRMZM2G035401_P01 3.21 Zea mays 1E-33 70 71 87 0 (0) M
v1_GRMZM2G035401_P01 4a53 Zea mays 1E-33 70 71 87 0 (0) M
Zm00001eb370450_P001 agpv5 Zea mays 1E-33 70 71 87 0 (0) M

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	A2L_zn_ribbon(1) Anti-TRAP(1) DnaJ_CXXCXGXG(1) DUF3797(1) HypA(1) OrfB_Zn_ribbon
TargetP:	Chloroplast (Class 1 C0.965; M0.097; S0.005; _0.026)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	143 aa (-cTP 76)
Molecular Weight	15.74 kDA(-cTP 8.51)
PI	10.63(-cTP 9.13)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)
21515685(GreenCut2)

Comparative Proteomics Data