PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G55490.1   gamete expressed protein 1
Lab Annot. gamete expressed protein 1
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G55490.9 11Arabidopsis thaliana05931001000 (0)S
AT5G55490.7 11Arabidopsis thaliana05091001000 (0)S
AT5G55490.8 11Arabidopsis thaliana04611001000 (0)S
Os09g27040.1 7Oryza sativa4E-16557743640 (0)S
Os07g47194.2 7Oryza sativa3E-10842340610 (0)_
Os07g47194.1 7Oryza sativa4E-10842340610 (0)_
v1_GRMZM2G388045_P01 4a53Zea mays5E-16261441610 (0)S
GRMZM2G388045_P01 3.21Zea mays5E-16261441610 (0)S
Zm00001eb314230_P001 agpv5Zea mays5E-16261441610 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Atg14(2) DUF1664(3) DUF2959(3) Spc7(2) TPR_MLP1_2(3)
TargetP: Secreted (Class 2 C0.023; M0.033; S0.749; _0.014)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 3 TMs
TAT position:
Length 593 aa (-cTP 524)
Molecular Weight 67.96 kDA(-cTP )
PI 5.00(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help