PPDB

PPDB	The Plant Proteome Database

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AT5G55400.1 Actin binding Calponin homology (CH) domain-containing protein

Lab Annot.

Mapman: 31.1 cell.organisation

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G55400.3 11 Arabidopsis thaliana 0 714 100 100 0 (0) C
AT5G55400.2 11 Arabidopsis thaliana 0 714 100 100 0 (0) C
AT4G26700.1 11 Arabidopsis thaliana 0 715 79 88 1 (1) _
Os02g48740.1 7 Oryza sativa 0 693 64 79 0 (0) _
Os02g37580.1 7 Oryza sativa 0 631 64 80 0 (0) _
Os01g33080.1 7 Oryza sativa 0 688 57 75 0 (0) M
Zm00001eb252890_P001 agpv5 Zea mays 0 692 63 80 0 (0) _
v1_GRMZM2G382341_P01 4a53 Zea mays 0 692 63 80 0 (0) _
GRMZM2G382341_P01 3.21 Zea mays 0 692 63 80 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CAMSAP_CH(4) CH(4) CH_2(4) EF-hand_4(1) EF-hand_7(1) SSP160(1)
TargetP:	Chloroplast (Class 5 C0.330; M0.110; S0.098; _0.294)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	714 aa (-cTP 663)
Molecular Weight	79.79 kDA(-cTP 74.22)
PI	5.13(-cTP 5.08)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
19200160(flower-stage 12)

Comparative Proteomics Data