PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G55210.1 hypothetical protein

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G22320.1 11 Arabidopsis thaliana 5E-22 134 45 59 0 (0) M
AT4G22320.2 11 Arabidopsis thaliana 6E-22 134 45 59 0 (0) M
Os08g25080.1 7 Oryza sativa 2E-10 114 35 51 0 (0) M
Os08g25080.2 7 Oryza sativa 9E-08 74 41 59 0 (0) M
Zm00001eb177430_P001 agpv5 Zea mays 8E-15 182 32 49 0 (0) M
GRMZM2G005646_P01 3.21 Zea mays 8E-15 182 32 49 0 (0) M
v1_GRMZM2G005646_P01 4a53 Zea mays 8E-15 182 32 49 6 (6) M

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BCL_N(2)
TargetP:	Chloroplast (Class 4 C0.795; M0.454; S0.000; _0.033)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	168 aa (-cTP 88)
Molecular Weight	18.53 kDA(-cTP 9.77)
PI	7.88(-cTP 4.40)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1494	Detail								leaf [A. thaliana]
1643	Detail								leaf [A. thaliana]	total leaf tissue	Wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data