PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G55000.1 potassium channel tetramerization domain-containing protein / pentapeptide repeat-containing protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G55000.2 11 Arabidopsis thaliana 0 289 97 97 1 (0) _
AT2G44920.2 11 Arabidopsis thaliana 8E-10 107 38 48 374 (285) C
AT2G44920.1 11 Arabidopsis thaliana 2E-08 98 38 48 139 (95) C
Os03g06160.1 7 Oryza sativa 6E-119 273 64 75 0 (0) C
Os10g30190.1 7 Oryza sativa 1E-103 281 60 72 0 (0) _
Os01g05080.1 7 Oryza sativa 1E-08 107 37 46 48 (48) C
Zm00001eb403220_P001 agpv5 Zea mays 2E-126 283 65 74 0 (0) _
GRMZM2G045257_P02 3.21 Zea mays 2E-126 283 65 74 0 (0) _
GRMZM2G045257_P03 3.21 Zea mays 2E-126 283 65 74 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BTB_2(1) BTB_3(1) Pentapeptide(6) Pentapeptide_3(5) Pentapeptide_4(3)
TargetP:	Cytoplasm (Class 3 C0.202; M0.155; S0.077; _0.748)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	290 aa (-cTP 254)
Molecular Weight	32.10 kDA(-cTP )
PI	8.01(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data