PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G54990.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G18110.1 11 Arabidopsis thaliana 2E-12 147 34 48 0 (0) _
AT1G18760.1 11 Arabidopsis thaliana 3E-09 44 47 61 0 (0) _
AT1G72220.1 11 Arabidopsis thaliana 8E-09 61 42 55 0 (0) _
Os04g50100.1 7 Oryza sativa 3E-10 71 43 56 0 (0) _
Os03g28080.1 7 Oryza sativa 1E-09 47 51 70 0 (0) S
Os03g05570.1 7 Oryza sativa 1E-09 101 36 49 0 (0) _
Zm00001eb120080_P001 agpv5 Zea mays 1E-09 48 45 68 0 (0) M
v1_GRMZM2G534288_P01 4a53 Zea mays 1E-09 48 45 68 0 (0) C
GRMZM2G534288_P01 3.21 Zea mays 1E-09 48 45 68 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) Prok-RING_4(2) RINGv(1) U-box(1) zf-ANAPC11(1) zf-C3H2C3(1) zf-C3HC4(
TargetP:	Cytoplasm (Class 2 C0.181; M0.087; S0.112; _0.898)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	226 aa (-cTP 203)
Molecular Weight	26.10 kDA(-cTP )
PI	9.10(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data