PPDB

 The Plant Proteome Database

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AT5G54940.1   Translation initiation factor SUI1 family protein
Lab Annot.
Mapman: 29.2.3 protein.synthesis.initiation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G54940.2 11Arabidopsis thaliana3E-781121001003 (1)_
AT5G54940.3 11Arabidopsis thaliana3E-781121001000 (0)_
AT4G27130.1 11Arabidopsis thaliana3E-5811373843 (1)_
Os05g41900.2 7Oryza sativa3E-6011574865 (5)_
Os05g41900.1 7Oryza sativa3E-6011574865 (5)_
Os07g34589.2 7Oryza sativa6E-58115738518 (18)_
GRMZM2G073535_P03 3.21Zea mays2E-58115728610 (10)C
v1_GRMZM2G073535_P03 4a53Zea mays2E-58115728612 (12)C
GRMZM2G073535_P01 3.21Zea mays2E-58115728620 (20)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Img2(1) ScdA_N(1) SUI1(1)
TargetP: Cytoplasm (Class 2 C0.120; M0.110; S0.154; _0.824)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 112 aa (-cTP 97)
Molecular Weight 12.72 kDA(-cTP )
PI 9.23(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2250Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help