PPDB

The Plant Proteome Database

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AT5G54920.1   polyadenylate-binding protein interacting protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G54920.2 11Arabidopsis thaliana052299990 (0)C
AT4G26990.1 11Arabidopsis thaliana1E-15649453660 (0)_
AT3G14010.1 11Arabidopsis thaliana5E-1212231552 (2)C
Os04g53450.1 7Oryza sativa1E-1510735610 (0)C
Os02g27950.1 7Oryza sativa2E-0789285730 (30)C
Os02g27950.2 7Oryza sativa2E-0789285730 (30)C
GRMZM2G150901_P03 3.21Zea mays1E-2750427410 (0)M
Zm00001eb431320_P001 agpv5Zea mays1E-2750427410 (0)M
v1_GRMZM2G150901_P03 4a53Zea mays1E-2750427410 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LSM14(1) PAM2(1) SM-ATX(1)
TargetP: Chloroplast (Class 5 C0.695; M0.023; S0.088; _0.496)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 517 aa (-cTP 504) (-lTP 392)
Molecular Weight 56.03 kDA(-cTP 54.55)(-lTP 42.89)
PI 9.29(-cTP 9.23)(-lTP 9.626)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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