PPDB

PPDB	The Plant Proteome Database

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AT5G54680.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.

Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G51070.1 11 Arabidopsis thaliana 1E-95 239 61 73 0 (0) _
AT1G51070.2 11 Arabidopsis thaliana 2E-84 195 65 77 0 (0) _
AT3G23210.2 11 Arabidopsis thaliana 5E-52 215 48 62 0 (0) _
Os07g35870.2 7 Oryza sativa 1E-75 195 61 77 0 (0) S
Os07g35870.1 7 Oryza sativa 6E-75 196 61 77 0 (0) _
Os08g04390.2 7 Oryza sativa 6E-70 204 59 68 0 (0) _
Zm00001eb173070_P001 agpv5 Zea mays 2E-69 186 60 73 0 (0) _
GRMZM2G017586_P01 3.21 Zea mays 2E-69 186 60 73 0 (0) _
v1_GRMZM2G017586_P01 4a53 Zea mays 2E-69 186 60 73 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_13(1) AAA_23(1) AIM3(1) AKNA(1) APG6_N(1) Atg14(1) ATG16(1) Ax_dynein_light(
TargetP:	Cytoplasm (Class 5 C0.377; M0.031; S0.022; _0.574)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	234 aa (-cTP 180)
Molecular Weight	25.49 kDA(-cTP )
PI	8.69(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data