PPDB

The Plant Proteome Database

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AT5G54660.1   HSP20-like chaperones superfamily protein

Lab Annot. small heat shock protein sHSP 21.7 - Class CVI
Mapman: 20.2.1 stress.abiotic.heat
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G53540.1 11Arabidopsis thaliana8E-1214828483 (3)_
AT1G59860.1 11Arabidopsis thaliana2E-0810926520 (0)_
AT1G07400.1 11Arabidopsis thaliana7E-0814325472 (2)_
Os05g42120.1 7Oryza sativa3E-5018747634 (4)M
Os03g15960.1 7Oryza sativa2E-1010331550 (0)_
Os03g16040.1 7Oryza sativa2E-0915525450 (0)_
GRMZM2G013970_P01 3.21Zea mays2E-4716949662 (0)M
Zm00001eb291920_P001 agpv5Zea mays2E-4716949660 (0)M
v1_GRMZM2G013970_P01 4a53Zea mays2E-4716949660 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Actino_peptide(1) HSP20(1)
TargetP: Cytoplasm (Class 2 C0.111; M0.086; S0.099; _0.908)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 192 aa (-cTP 156)
Molecular Weight 21.66 kDA(-cTP )
PI 5.47(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help