PPDB

The Plant Proteome Database

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AT5G54520.1   Transducin/WD40 repeat-like superfamily protein

Lab Annot.
Mapman: 27.1.1 RNA.processing.splicing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G10580.1 11Arabidopsis thaliana2E-5531233531 (1)_
AT4G02730.1 11Arabidopsis thaliana1E-1830024440 (0)_
AT2G43770.1 11Arabidopsis thaliana4E-1830926434 (2)C
Os02g21490.1 7Oryza sativa3E-15737657730 (0)_
Os03g27970.2 6Oryza sativa2E-5432032521 (1)_
Os03g27970.1 7Oryza sativa4E-5431932522 (2)_
Zm00001eb164250_P001 agpv5Zea mays1E-15246249650 (0)_
Zm00001eb118470_P001 agpv5Zea mays1E-15246249650 (0)_
v1_GRMZM2G136014_P01 4a53Zea mays1E-15246249650 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(4) Frtz(2) Ge1_WD40(2) WD40(6)
TargetP: Cytoplasm (Class 1 C0.097; M0.032; S0.011; _0.937)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 457 aa (-cTP 415)
Molecular Weight 50.61 kDA(-cTP )
PI 8.24(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help