PPDB

PPDB	The Plant Proteome Database

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AT5G54510.1 Auxin-responsive GH3 family protein

Lab Annot.

Mapman: 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G27260.1 11 Arabidopsis thaliana 0 612 90 94 1 (1) _
AT4G37390.1 11 Arabidopsis thaliana 0 594 65 79 0 (0) _
AT2G14960.1 11 Arabidopsis thaliana 0 592 66 79 0 (0) _
Os01g57610.1 7 Oryza sativa 0 610 67 78 0 (0) _
Os05g42150.1 7 Oryza sativa 0 599 67 80 0 (0) C
Os01g55940.1 7 Oryza sativa 0 598 65 79 0 (0) S
Zm00001eb151250_P001 agpv5 Zea mays 0 615 67 78 0 (0) _
v1_GRMZM2G366873_P01 4a53 Zea mays 0 619 64 77 0 (0) _
GRMZM2G366873_P01 3.21 Zea mays 0 619 64 77 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	GH3(1) Imm63(1)
TargetP:	Cytoplasm (Class 2 C0.215; M0.071; S0.118; _0.836)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	612 aa (-cTP 604)
Molecular Weight	68.90 kDA(-cTP )
PI	5.53(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1123	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type
1124	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)

Comparative Proteomics Data