PPDB

The Plant Proteome Database

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AT5G54440.1   CLUB

Lab Annot. CLUB
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G54440.2 11Arabidopsis thaliana0125999990 (0)_
AT5G54440.3 11Arabidopsis thaliana010701001000 (0)_
Os12g36760.1 7Oryza sativa01260678117 (17)_
Zm00001eb137170_P003 agpv5Zea mays0126366800 (0)_
Zm00001eb137170_P004 agpv5Zea mays0126366800 (0)_
Zm00001eb137170_P001 agpv5Zea mays074872840 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Foie-gras_1(1) TPR_2(1) TRAPPC10(1)
TargetP: Cytoplasm (Class 3 C0.041; M0.093; S0.215; _0.729)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1259 aa (-cTP 1215)
Molecular Weight 140.68 kDA(-cTP )
PI 5.81(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2247Detail       seedlings [A. thaliana] total tissue atg5
2286Detail        [A. thaliana] Clp C1 WT
2287Detail        [A. thaliana] Clp C1 WT
2289Detail        [A. thaliana] Clp C1 TRAP
2290Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


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