PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G54400.1   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G15530.1 11Arabidopsis thaliana6E-15229178860 (0)_
AT3G15530.2 11Arabidopsis thaliana6E-15229178860 (0)_
Os04g42870.3 7Oryza sativa7E-0714134450 (0)C
GRMZM2G099729_P01 3.21Zea mays7E-06134334413 (4)C
v1_GRMZM2G099729_P01 4a53Zea mays7E-0613433444 (4)C
Zm00001eb426240_P002 agpv5Zea mays7E-0613433440 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FtsJ(1) Methyltransf_11(1) Methyltransf_12(1) Methyltransf_23(1) Methyltransf_25
TargetP: Cytoplasm (Class 3 C0.000; M0.387; S0.114; _0.887)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 292 aa (-cTP 194)
Molecular Weight 32.44 kDA(-cTP )
PI 9.51(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17151019(vacuole - suspension cell)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help