PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G54310.1 ARF-GAP domain 5

Lab Annot.

ARF-GAP domain 5
Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G17660.1 11 Arabidopsis thaliana 1E-69 230 53 66 0 (0) _
AT3G17660.2 11 Arabidopsis thaliana 1E-69 230 53 66 0 (0) _
AT3G17660.4 11 Arabidopsis thaliana 1E-68 126 76 87 0 (0) _
Os07g37650.1 7 Oryza sativa 3E-132 517 50 62 6 (6) _
Os06g40704.1 7 Oryza sativa 9E-27 118 46 66 0 (0) _
Os06g40704.3 7 Oryza sativa 9E-27 118 46 66 0 (0) _
GRMZM2G129354_P01 3.21 Zea mays 4E-154 504 53 64 8 (0) _
v1_GRMZM2G129354_P01 4a53 Zea mays 4E-154 504 53 64 1 (1) _
Zm00001eb324390_P003 agpv5 Zea mays 4E-154 504 53 64 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ArfGap(1)
TargetP:	Cytoplasm (Class 2 C0.190; M0.068; S0.023; _0.841)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	483 aa (-cTP 414)
Molecular Weight	52.59 kDA(-cTP )
PI	7.68(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
325	Detail								BY2 cell suspension [Tobacco]	cell wall enriched	wild-type
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2247	Detail								seedlings [A. thaliana]	total tissue	atg5

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data