PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G54260.1   DNA repair and meiosis protein (Mre11)
Lab Annot. DNA repair and meiosis protein (Mre11)
Mapman: 28.2 DNA.repair
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G54260.2 11Arabidopsis thaliana072099990 (0)_
Os04g54340.1 7Oryza sativa072668800 (0)_
Os08g08030.1 7Oryza sativa052557740 (0)_
v1_GRMZM2G106056_P02 4a53Zea mays072267790 (0)_
GRMZM2G106056_P02 3.21Zea mays072267790 (0)_
Zm00001eb069270_P001 agpv5Zea mays072267790 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Metallophos(1) Metallophos_2(1) Mre11_DNA_bind(1) Myc_N(1) Pox_Ag35(1)
TargetP: Cytoplasm (Class 2 C0.032; M0.152; S0.156; _0.919)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 720 aa (-cTP 709)
Molecular Weight 80.29 kDA(-cTP )
PI 6.21(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help