PPDB

PPDB	The Plant Proteome Database

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AT5G54200.1 Transducin/WD40 repeat-like superfamily protein

Lab Annot.

Mapman: 33.99 development.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G15470.1 11 Arabidopsis thaliana 0 888 57 70 0 (0) _
AT2G37670.2 11 Arabidopsis thaliana 1E-168 844 40 55 0 (0) _
AT2G37670.1 11 Arabidopsis thaliana 1E-168 844 40 55 18 (18) _
Os02g42590.1 7 Oryza sativa 0 810 47 62 0 (0) _
Os04g58180.1 7 Oryza sativa 0 665 53 66 0 (0) _
Os04g44700.1 7 Oryza sativa 0 771 44 58 0 (0) _
Zm00001eb075850_P001 agpv5 Zea mays 0 822 48 62 0 (0) _
Zm00001eb075850_P004 agpv5 Zea mays 0 822 48 62 0 (0) _
GRMZM2G027049_P01 3.21 Zea mays 0 822 48 62 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC4_WD40(4) WD40(6) WD40_like(1)
TargetP:	Cytoplasm (Class 4 C0.025; M0.444; S0.014; _0.784)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	825 aa (-cTP 809)
Molecular Weight	93.02 kDA(-cTP )
PI	7.82(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data