PPDB

The Plant Proteome Database

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AT5G54170.1   Polyketide cyclase/dehydrase and lipid transport superfamily protein

Lab Annot. Polyketide cyclase/dehydrase and lipid transport protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G64720.1 11Arabidopsis thaliana2E-13643047610 (0)S
AT4G14500.1 11Arabidopsis thaliana4E-11942645590 (0)_
AT3G23080.1 11Arabidopsis thaliana1E-10742844580 (0)_
Os04g02910.3 7Oryza sativa5E-12730457720 (0)_
Os04g02910.1 7Oryza sativa8E-12630457720 (0)M
Os02g03230.1 7Oryza sativa1E-11132351680 (0)M
Zm00001eb419490_P004 agpv5Zea mays4E-12642546600 (0)S
Zm00001eb419490_P003 agpv5Zea mays5E-12642546610 (0)S
Zm00001eb419490_P001 agpv5Zea mays1E-12432954680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: START(1)
TargetP: Chloroplast (Class 5 C0.080; M0.061; S0.057; _0.078)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 449 aa (-cTP 347)
Molecular Weight 50.23 kDA(-cTP 39.23)
PI 9.60(-cTP 9.51)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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