PPDB

The Plant Proteome Database

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AT5G54100.1   SPFH/Band 7/PHB domain-containing membrane-associated protein family

Lab Annot. band 7 protein
Mapman: 35.1 not assigned.no ontology
Curated Location
TAIR curated location: mitochondrion14671022,11743114
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G27585.1 11Arabidopsis thaliana0332828723 (20)M
AT3G01290.1 11Arabidopsis thaliana5E-14192295070 (69)_
AT5G62740.1 11Arabidopsis thaliana4E-10191274825 (25)_
Os08g06200.1 7Oryza sativa7E-144320657822 (22)M
Os08g15600.1 7Oryza sativa4E-227167780 (0)M
Os06g04460.1 7Oryza sativa1E-0917424490 (0)S
GRMZM2G023073_P02 3.21Zea mays6E-145310658020 (20)M
Zm00001eb415710_P001 agpv5Zea mays6E-14531065800 (0)M
v1_GRMZM2G465069_P01 4a53Zea mays4E-143304648016 (16)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Band_7(2) Band_7_1(1) Band_7_C(1)
TargetP: Mitochondria (Class 2 C0.046; M0.672; S0.006; _0.013)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 401 aa (-cTP 367)
Molecular Weight 43.61 kDA(-cTP )
PI 9.11(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2268Detail       seedlings [A. thaliana] total tissue wild-type
2272Detail       seedlings [A. thaliana] total tissue wild-type
2273Detail       seedlings [A. thaliana] total tissue wild-type
2275Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
16618929(MITO/PLASTID-LOPIT-callus)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21311031(mitochondria)
21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


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