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AT5G54080.1
homogentisate 1%2C2-dioxygenase
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| Lab Annot. |
homogentisate 1,2-dioxygenase (HGO)
Mapman: 13.2.6.2 amino acid metabolism.degradation.aromatic aa.tyrosine |
| Curated Location |
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
HgmA(1) |
| TargetP: |
Cytoplasm (Class 1 C0.102; M0.064; S0.028; _0.915) |
| Predotar: |
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| Subcel. Location: |
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| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
461 aa (-cTP 380) |
| Molecular Weight |
51.45 kDA(-cTP ) |
| PI |
5.77(-cTP ) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 621 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 622 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type |
| 1202 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpp3 null |
| 1207 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpp3 null |
| 1208 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpp3 null |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1418 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 3) |
| 1540 | Detail | | | | | | | | leaf [A. thaliana] | Thylakoids plastoglobule | wild-type |
| 2003 | Detail | | | | | | | | leaf [A. thaliana] | over expressed M48 plastoglobule | M48 |
| 2006 | Detail | | | | | | | | leaf [A. thaliana] | over expressed M48 plastoglobule | M48 |
| 2008 | Detail | | | | | | | | leaf [A. thaliana] | RNAi PG plastoglobule | RNAi |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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19525416(leaf (wt and clpr4-1 mutant))
21693672(wound-regulated leaf proteome (wt))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
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Comparative Proteomics Data
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